BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A06SP1|AL428649
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1767 0.0
>3x_Contig1677
Length = 15081
Score = 1767 bits (890), Expect = 0.0
Identities = 899/902 (99%), Gaps = 1/902 (0%)
Strand = Plus / Plus
Query: 1 gatcctttgttgaaca-tgcacacggtcatggtcagccatcaagcgaatcccaaagccat 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6029 gatcctttgttgaacaatgcacacggtcatggtcagccatcaagcgaatcccaaagccat 6088
Query: 60 agtaatggatatcataaacagggacagtctcagcaacctctgttatctctgaacaagagg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6089 agtaatggatatcataaacagggacagtctcagcaacctctgttatctctgaacaagagg 6148
Query: 120 aagttgcttgcgaaggctcacgtcgataagcatcacagtaagaaaaagctaagcacaacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6149 aagttgcttgcgaaggctcacgtcgataagcatcacagtaagaaaaagctaagcacaacc 6208
Query: 180 agagcaagacctgcgtttgtaaacaagttatggagtatggtcaatgacaagagcaatgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6209 agagcaagacctgcgtttgtaaacaagttatggagtatggtcaatgacaagagcaatgag 6268
Query: 240 aaatttatccactggtctactagcggtgagtccattgttgtcccgaacagagaacgcttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6269 aaatttatccactggtctactagcggtgagtccattgttgtcccgaacagagaacgcttt 6328
Query: 300 gttcaagaggttttacctaaatatttcaaacactctaactttgccagtttcgtgcgtcaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6329 gttcaagaggttttacctaaatatttcaaacactctaactttgccagtttcgtgcgtcaa 6388
Query: 360 ctaaacatgtatgggtggcacaaagttcaagatgtgaagagcggtagtatgttgagcaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6389 ctaaacatgtatgggtggcacaaagttcaagatgtgaagagcggtagtatgttgagcaat 6448
Query: 420 aatgatagcagatgggaatttgagaacgaaaacttcaagagaggtaaggagtatttgctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6449 aatgatagcagatgggaatttgagaacgaaaacttcaagagaggtaaggagtatttgctt 6508
Query: 480 gagaatattgttagacaaaaatcaaacaccaacatccttggtggaaccactaatgcggag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6509 gagaatattgttagacaaaaatcaaacaccaacatccttggtggaaccactaatgcggag 6568
Query: 540 gttgacattcacattctattgaatgagttggaaaccgtcaagtacaatcagctggccatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6569 gttgacattcacattctattgaatgagttggaaaccgtcaagtacaatcagctggccatt 6628
Query: 600 gctgaagatttgaagaggataactaaagataatgaaatgttatggaaggagaatatgatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6629 gctgaagatttgaagaggataactaaagataatgaaatgttatggaaggagaatatgatg 6688
Query: 660 gccagagaaagacaccaatcacaacaacaagttctagaaaaactcctaaggtttttgtcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6689 gccagagaaagacaccaatcacaacaacaagttctagaaaaactcctaaggtttttgtcc 6748
Query: 720 agtgttttcggaccaaactctgcaaagaccattggcaatgggttccaacctgatttgatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6749 agtgttttcggaccaaactctgcaaagaccattggcaatgggttccaacctgatttgatc 6808
Query: 780 catgaactcagtgacatgcaagtgaaccmcatgagcaacaacaaccataacaataccgga 839
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6809 catgaactcagtgacatgcaagtgaaccacatgagcaacaacaaccataacaataccgga 6868
Query: 840 aatataaaccccaacgcataccataacgaaactgacgacccmatggccaacgtattcggt 899
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6869 aatataaaccccaacgcataccataacgaaactgacgacccaatggccaacgtattcggt 6928
Query: 900 cc 901
||
Sbjct: 6929 cc 6930
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6500
Number of Sequences: 1807
Number of extensions: 6500
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)